Two QSAR models for predicting the toxicity of chemicals towards Tetrahymena pyriformis based on topological-norm descriptors and spatial-norm descriptors

数量结构-活动关系 梨形四膜虫 分子描述符 规范(哲学) 数学 生物系统 计算机科学 四膜虫 化学 机器学习 生物 政治学 生物化学 法学
作者
Qi Jia,S. Wang,Mengxian Yu,Q. Wang,Fangyou Yan
出处
期刊:Sar and Qsar in Environmental Research [Taylor & Francis]
卷期号:34 (2): 147-161 被引量:2
标识
DOI:10.1080/1062936x.2023.2171478
摘要

ABSTRACTABSTRACTQuantitative structure-activity relationship (QSAR) is important for safe, rapid and effective risk assessment of chemicals. In this study, two QSAR models were established with 1230 chemicals to predict toxicity towards Tetrahymena pyriformis using multiple linear regression (MLR) method. The topological(T)-QSAR model was developed by using topological-norm descriptors generated from the topological structure, and the spatial(S)-QSAR model were built with spatial-norm descriptors obtained from the three-dimensional structure of molecules and topological-norm descriptors. The r2training and r2test are 0.8304 and 0.8338 for the T-QSAR model, and 0.8485 and 0.8585 for the S-QSAR model, which means that T-QSAR model and S-QSAR model can be used to predict toxicity quickly and accurately. In addition, we also conducted validation on the developed models. Satisfying validation results and statistical parameters demonstrated that QSAR models based on the topological-norm descriptors and spatial-norm descriptors proposed in this paper could be further utilized to estimate the toxicity of chemicals towards Tetrahymena pyriformis.KEYWORDS: QSARtoxicitychemicalstopological-norm descriptorsspatial-norm descriptorsTetrahymena pyriformis Disclosure statementThe authors confirm that this article has potential conflict of interest.Supplementary materialSupplemental data for this article can be accessed at: https://doi.org/10.1080/1062936X.2023.2171478Additional informationFundingThis work was supported by the National Natural Science Foundation of China [NO: 22278319 and 21808167].
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