小RNA
生物
基因
微阵列分析技术
微阵列
乳腺癌
转录因子
下调和上调
癌症研究
计算生物学
基因表达
癌症
基因表达谱
生物信息学
环状RNA
遗传学
作者
Danfeng Gao,Xiufen Zhang,Beibei Liu,Meng Dong,Kai Fang,Zijian Guo,Lihua Li
出处
期刊:Epigenomics
[Future Medicine]
日期:2017-09-01
卷期号:9 (9): 1175-1188
被引量:141
标识
DOI:10.2217/epi-2017-0055
摘要
We aimed to identify circular RNAs (circRNAs) associated with breast cancer chemoresistance.CircRNA microarray expression profiles were obtained from Adriamycin (ADM) resistant MCF-7 breast cancer cells (MCF-7/ADM) and parental MCF-7 cells and were validated using quantitative real-time reverse transcription PCR. The expression data were analyzed bioinformatically.We detected 3093 circRNAs and identified 18 circRNAs that are differentially expressed between MCF-7/ADM and MCF-7 cells; after validating by quantitative real-time reverse transcription PCR, we predicted the possible miRNAs and potential target genes of the seven upregulated circRNAs using TargetScan and miRanda. The bioinformatics analysis revealed several target genes related to cancer-related signaling pathways. Additionally, we discovered a regulatory role of the circ_0006528-miR-7-5p-Raf1 axis in ADM-resistant breast cancer.These results revealed that circRNAs may play a role in breast cancer chemoresistance and that hsa_circ_0006528 might be a promising candidate for further functional analysis.
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