Transcriptional Comparison of Human and Murine Retinal Neovascularization

下调和上调 糖尿病性视网膜病变 视网膜 生物 血管生成 新生血管 保守序列 视网膜病变 计算生物学 细胞生物学 基因 遗传学 内分泌学 糖尿病 生物化学 基序列
作者
Laurenz Pauleikhoff,Stefaniya Boneva,Myriam Boeck,Anja Schlecht,Günther Schlunck,Hansjürgen Agostini,Clemens Lange,Julian Wolf
出处
期刊:Investigative Ophthalmology & Visual Science [Association for Research in Vision and Ophthalmology (ARVO)]
卷期号:64 (15): 46-46 被引量:2
标识
DOI:10.1167/iovs.64.15.46
摘要

Purpose: Retinal neovascularization (RNV) is the leading cause of vision loss in diseases like proliferative diabetic retinopathy (PDR). A significant failure rate of current treatments indicates the need for novel treatment targets. Animal models are crucial in this process, but current diabetic retinopathy models do not develop RNV. Although the nondiabetic oxygen-induced retinopathy (OIR) mouse model is used to study RNV development, it is largely unknown how closely it resembles human PDR. Methods: We therefore performed RNA sequencing on murine (C57BL/6J) OIR retinas (n = 14) and human PDR RNV membranes (n = 7) extracted during vitrectomy, each with reference to control tissue (n=13/10). Differentially expressed genes (DEG) and associated biological processes were analyzed and compared between human and murine RNV to assess molecular overlap and identify phylogenetically conserved factors. Results: In total, 213 murine- and 1223 human-specific factors were upregulated with a small overlap of 94 DEG (7% of human DEG), although similar biological processes such as angiogenesis, regulation of immune response, and extracellular matrix organization were activated in both species. Phylogenetically conserved mediators included ANGPT2, S100A8, MCAM, EDNRA, and CCR7. Conclusions: Even though few individual genes were upregulated simultaneously in both species, similar biological processes appeared to be activated. These findings demonstrate the potential and limitations of the OIR model to study human PDR and identify phylogenetically conserved potential treatment targets for PDR.
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