[Risk modeling based on HER-2 related genes for bladder cancer survival prognosis assessment].

膀胱癌 列线图 肿瘤科 比例危险模型 接收机工作特性 内科学 生存分析 医学 癌症 生物
作者
Huan Rui Liu,Xiang Peng,Sen Lin Li,Xin Gou
出处
期刊:PubMed 卷期号:55 (5): 793-801
链接
标识
摘要

To investigate the correlation between the human epidermal growth factor receptor-2-related genes (HRGs) and survival prognosis of bladder cancer and to construct a predictive model for survival prognosis of bladder cancer patients based on HRGs.HRGs in bladder cancer were found by downloading bladder tumor tissue mRNA sequencing data and clinical data from the cancer genome atlas (TCGA), downloading HER-2 related genes from the molecular signatures database (MsigDB), and crossing the two databases. Further identifying HRGs associated with bladder cancer survival (P < 0.05) by using single and multi-factor Cox regression analysis and constructing HRGs risk score model (HRSM), the bladder cancer patients were categorized into high-risk and low-risk groups accor-ding to the median risk score. Survival analysis of the patients in high- and low-risk groups was conducted using R language and correlation of HRGs with clinical characteristics. A multi-factor Cox regression analysis was used to verify the independent factors affecting the prognosis of the patients with bladder cancer. The area under the curve (AUC) of the receiver operating characteristic curve (ROC) of HRSM was calculated, and a nomogram was constructed for survival prediction of the bladder cancer patients. Analysis of HRSM and patient immune cell infiltration correlation was made using the TIMER database.A total of 13 HRGs associated with patient survival were identified in this study. Five genes (BTC, CDC37, EGF, PTPRR and EREG) were selected for HRSM by multi-factor Cox regression analysis. The 5-year survival rate of the bladder cancer patients in the high-risk group was significantly lower than that of the patients in the low-risk group. High expression of PTPRR was found to be significantly and negatively correlated with tumor grade and stage by clinical correlation analysis, while EREG was found to be the opposite; Increased expression of EGF was associated with high grade, however, the high expression ofCDC37showed the opposite result. And no significant correlation was found between BTC expression and clinical features. Correlation analysis of HRSM with immune cells revealed a positive correlation between risk score and infiltration of dendritic cells, CD8+T cells, CD4+T cells, neutrophils and macrophages.HRGs have an important role in the prognosis of bladder cancer patients and may serve as new predictive biomarkers and potential targets for treatment.

科研通智能强力驱动
Strongly Powered by AbleSci AI
更新
PDF的下载单位、IP信息已删除 (2025-6-4)

科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
Zhang发布了新的文献求助10
1秒前
zzz发布了新的文献求助30
3秒前
4秒前
yim发布了新的文献求助10
6秒前
充电宝应助hhx采纳,获得10
7秒前
8秒前
在水一方应助Zhang采纳,获得10
9秒前
所所应助内向含桃采纳,获得10
9秒前
9秒前
10秒前
可靠雅青完成签到,获得积分10
11秒前
11秒前
Serene完成签到,获得积分10
12秒前
大面包发布了新的文献求助10
12秒前
量子星尘发布了新的文献求助10
13秒前
111完成签到,获得积分20
13秒前
xu发布了新的文献求助10
13秒前
Ava应助TJY采纳,获得50
14秒前
www完成签到,获得积分10
14秒前
王滕发布了新的文献求助80
14秒前
Hello应助111111采纳,获得10
14秒前
嘿嘿发布了新的文献求助10
16秒前
暖吱关注了科研通微信公众号
16秒前
tong发布了新的文献求助10
16秒前
早安发布了新的文献求助10
17秒前
今后应助luobote采纳,获得10
17秒前
徐若楠发布了新的文献求助10
17秒前
17秒前
ding应助fu采纳,获得10
19秒前
调色盘完成签到,获得积分10
19秒前
21秒前
一个快乐的吃货完成签到,获得积分10
21秒前
22秒前
22秒前
二马三乡发布了新的文献求助10
25秒前
25秒前
调色盘发布了新的文献求助20
26秒前
26秒前
寒冷茈发布了新的文献求助10
27秒前
Eileen发布了新的文献求助10
27秒前
高分求助中
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
List of 1,091 Public Pension Profiles by Region 1621
Les Mantodea de Guyane: Insecta, Polyneoptera [The Mantids of French Guiana] | NHBS Field Guides & Natural History 1500
Lloyd's Register of Shipping's Approach to the Control of Incidents of Brittle Fracture in Ship Structures 1000
Brittle fracture in welded ships 1000
Metagames: Games about Games 700
Laryngeal Mask Anesthesia: Principles and Practice. 2nd ed 500
热门求助领域 (近24小时)
化学 材料科学 生物 医学 工程类 计算机科学 有机化学 物理 生物化学 纳米技术 复合材料 内科学 化学工程 人工智能 催化作用 遗传学 数学 基因 量子力学 物理化学
热门帖子
关注 科研通微信公众号,转发送积分 5572037
求助须知:如何正确求助?哪些是违规求助? 4657138
关于积分的说明 14719690
捐赠科研通 4598044
什么是DOI,文献DOI怎么找? 2523550
邀请新用户注册赠送积分活动 1494303
关于科研通互助平台的介绍 1464404