卵菌
生物
计算生物学
转录因子
基因组
管道(软件)
信息学
计算机科学
遗传学
基因
电气工程
程序设计语言
工程类
作者
Jongsun Park,Jaejin Park,Suwang Jang,Seryun Kim,Sunghyung Kong,Jaeyoung Choi,Kyohun Ahn,Juhyeon Kim,Seungmin Lee,Sunggon Kim,Bongsoo Park,Kyongyong Jung,Soonok Kim,Seogchan Kang,Yong‐Hwan Lee
出处
期刊:Bioinformatics
[Oxford University Press]
日期:2008-02-26
卷期号:24 (7): 1024-1025
被引量:167
标识
DOI:10.1093/bioinformatics/btn058
摘要
Abstract Summary: Genomes of more than 60 fungal species have been sequenced to date, yet there has been no systematic approach to analyze fungal transcription factors (TFs) kingdom widely. We developed a standardized pipeline for annotating TFs in fungal genomes. Resulting data have been archived in a new database termed the Fungal Transcription Factor Database (FTFD). In FTFD, 31 832 putative fungal TFs, identified from 62 fungal and 3 Oomycete species, were classified into 61 families and phylogenetically analyzed. The FTFD will serve as a community resource supporting comparative analyses of the distribution and domain structure of TFs within and across species. Availability: All data described in this study can be browsed through the FTFD web site at http://ftfd.snu.ac.kr/. Contact: yonglee@snu.ac.kr
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