生物
流动遗传元素
基因组
背景(考古学)
毒力
基因
遗传学
质粒
全基因组测序
DNA测序
古生物学
作者
Rory Cave,Mary M. Ter-Stepanyan,Hermine V. Mkrtchyan
标识
DOI:10.1128/spectrum.00356-23
摘要
Escherichia coli sequence type 131 (ST131) has contributed to the spread of extended-spectrum beta-lactamase (ESBL) and has emerged as the dominant cause of hospital- and community-acquired urinary tract infections. Here, we report for the first time an in-depth analysis of whole-genome sequencing (WGS) of 4 ESBL-producing E. coli ST131 isolates recovered from patients in two hospitals in Armenia using Illumina short-read sequencing for accurate base calling to determine their genotype and to infer their phylogeny and using Oxford Nanopore Technologies long-read sequencing to resolve plasmid and chromosomal genetic elements. Genotypically, the four Armenian isolates were identified as part of the
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