Application of real‐time PCR–based multicolor melting curve with automatic analysis system in pregestational and prenatal thalassemia diagnoses

多重连接依赖探针扩增 产前诊断 桑格测序 地中海贫血 基因型 熔化曲线分析 分子生物学 等位基因 生物 β地中海贫血 多路复用 聚合酶链反应 基因组DNA 遗传学 突变 基因 胎儿 怀孕 外显子
作者
Xuewei Tang,Fan Jiang,Li J,Xiao‐Mei Lin,Jianying Zhou,Junhui Wan,Liandong Zuo,Ying Qu,Fatao Li,Guilan Chen,Dong‐Zhi Li
出处
期刊:Annals of Human Genetics [Wiley]
卷期号:87 (6): 316-325
标识
DOI:10.1111/ahg.12531
摘要

To evaluate the value of the real-time PCR-based multicolor melting curve analysis (MMCA) with an automatic analysis system used in a mass thalassemia screening and prenatal diagnosis program.A total of 18,912 peripheral blood samples from 9456 couples and 1150 prenatal samples were detected by MMCA assay. All prenatal samples were also tested by a conventional method. Samples with unknown melting peaks, unusual peak height ratios between a wild allele and a mutant allele, or a discordant phenotype-genotype match were further studied by using multiplex ligation-dependent probe amplification (MLPA) or Sanger sequencing. All MMCA results were automatically analyzed and manually checked. The consistency between MMCA assay and conventional methods among prenatal samples was investigated.Except for initiation codon (T > G) (HBB:c.2T > G), all genotypes of thalassemia inside the scope of conventional methods were detected by MMCA assay. Additionally, 27 carriers with 10 rare HBB variants, 13 with α fusion gene, 1 with a rare deletion in α globin gene, and 1 with rare HBA variant were detected by using MMCA assay.MMCA can be an alternative approach used in routine thalassemia carrier screening and prenatal diagnosis for its high throughput, sufficient stability, low cost, and easy operation.
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