化学
成核
气相
采样(信号处理)
人工神经网络
化学物理
相(物质)
计算化学
物理化学
人工智能
探测器
有机化学
电信
计算机科学
作者
Shengyuan Xu,Li‐Ling Wu,Zhenyu Li
出处
期刊:Acta Chimica Sinica
[Shaghai Institute of Organic Chemistry]
日期:2022-01-01
卷期号:80 (5): 598-598
被引量:1
摘要
Due to their low density in atmosphere, theoretical simulations of the nucleation of gas-phase molecules are computationally very expensive.In this study, neural network potential (NNP) is combined with enhanced sampling techniques to effectively investigate the nucleation of water clusters in gas phase.The neural network potential is trained based on water-cluster energies and forces from density functional theory (DFT).The problem that the binding between water molecules is too weak in the previous empirical force field model has been solved in the NNP.This NNP potential is then applied to Monte Carlo simulations in grand canonical ensemble with enhanced sampling methods such as aggregation-volume-bias Monte Carlo (AVBMC) and transition-matrix Monte Carlo (TMMC) to realize a random walk among different cluster sizes.Probability distribution of water cluster sizes and the corresponding Gibbs free energies can then be obtained.Subsequently, the evaporation rates of water clusters can be calculated via umbrella sampling Monte Carlo simulations in canonical ensemble combined with variational transition state theory (VTST).We observe a big change of free energy and evaporation rate from tetramer to pentamer.A statistical analysis of the number of hydrogen bonds suggests that more hydrogen bonds are required to be broken in the evaporation reaction of tetramer compared to that of trimer and pentamer.Structure analysis indicates that, although the ground state of the pentamer has a two-dimensional ring structure, three-dimensional hydrogen bond network begins to form in pentamer at finite temperature.Therefore, it is a two-dimensional to three-dimensional transition from tetramer to pentamer.The fact that the most probable configuration of pentamer is different from the lowest energy configuration demonstrates the importance of molecular simulations.Simply finding the lowest energy configuration via global geometry optimization and then calculating the free energy within a harmonic approximation of vibrations are not a universal protocol for cluster systems.Methods used in this study are expected to be applicable for more complicated multicomponent systems, which opens an avenue for the research of particulate matter formation in atmosphere.
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