Identification of common microRNA between COPD and non-small cell lung cancer through pathway enrichment analysis

小RNA 慢性阻塞性肺病 生物 表观遗传学 肺癌 计算生物学 生物途径 微阵列 癌症 生物信息学 微阵列分析技术 发病机制 基因 基因表达 遗传学 免疫学 医学 肿瘤科 内科学
作者
Amirhossein Fathinavid,Mohadeseh Zarei Ghobadi,Ali Najafi,Ali Masoudi-Nejad
出处
期刊:BMC Genetics [Springer Nature]
卷期号:22 (1) 被引量:4
标识
DOI:10.1186/s12863-021-00986-z
摘要

Different factors have been introduced which influence the pathogenesis of chronic obstructive pulmonary disease (COPD) and non-small cell lung cancer (NSCLC). COPD as an independent factor is involved in the development of lung cancer. Moreover, there are certain resemblances between NSCLC and COPD, such as growth factors, activation of intracellular pathways, as well as epigenetic factors. One of the best approaches to understand the possible shared pathogenesis routes between COPD and NSCLC is to study the biological pathways that are activated. MicroRNAs (miRNAs) are critical biomolecules that implicate the regulation of several biological and cellular processes. As such, the main goal of this study was to use a systems biology approach to discover common dysregulated miRNAs between COPD and NSCLC, one that targets most genes within common enriched pathways.To reconstruct the miRNA-pathways for each disease, we used the microarray miRNA expression data. Then, we employed "miRNA set enrichment analysis" (MiRSEA) to identify the most significant joint miRNAs between COPD and NSCLC based on the enrichment scores. Overall, our study revealed the involvement of the targets of miRNAs (such as has-miR-15b, hsa-miR-106a, has-miR-17, has-miR-103, and has-miR-107) in the most important common biological pathways.According to the promising results of the pathway analysis, the identified miRNAs can be utilized as the new potential signatures for therapy through understanding the molecular mechanisms of both diseases.
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