Mantle cell lymphomas with low levels of cyclin D1 long mRNA transcripts are highly proliferative and can be discriminated by elevated cyclin A2 and cyclin B1

Abstract The role of transcript variants of cyclin D1 in cancer biology is unclear. Most tumors with high levels of cyclin D1 express 2 transcripts due to alternative splicing: one full‐length transcript of 4.4 kb and one short transcript of approximately 1.7 kb. The short transcript lacks part of the 3′UTR region regulating mRNA stability and has a longer half‐life. In our study, the contribution of each of these mRNAs to gene expression and cell proliferation has been investigated in mantle cell lymphoma (MCL), a B cell lymphoma characterized by a specific gene translocation resulting in enhanced expression of cyclin D1. A subset of MCL tumors with low levels of the long cyclin D1 transcript (cyclin D1 3′UTR) was identified by quantitative PCR and by oligonucleotide array hybridization. This tumor‐subset had 3.4‐fold higher levels of the short form of cyclin D1 mRNA ( p < 0.0001) and had higher expression of cyclin D1 protein. Gene expression analysis identified a number of cell‐cycle regulatory genes as upregulated. There was a significant difference in frequencies of cyclin B1 ( p = 0.0006) and cyclin A2 ( p = 0.0006) positive cells that discriminated MCL with low cyclin D1 3′UTR from other highly proliferative MCL. Among differentially expressed genes, there was a highly upregulated gene with homology to the group of cell‐cycle promoting E2F transcription partners, E2F_TDP5 . Several of the upregulated genes, such as TOP2A , AURORA A and RRM2 may influence a response to therapy. Identification of MCL with low cyclin D1 3′UTR is important because it seems to be associated with shorter overall survival. © 2005 Wiley‐Liss, Inc.