Shifting the limits in wheat research and breeding using a fully annotated reference genome

基因组 生物 参考基因组 基因组学 计算生物学 基因 背景(考古学) 数量性状位点 遗传学 古生物学
作者
R. Appels,Arnaud Bellec,Nils Stein,Natasha Glover,Beat Keller,Françoise Alfama,Curtis Pozniak,Frédéric Choulet,Assaf Distelfeld,Jesse Poland,Gil Ronen,Hadi Quesneville,Omer Barad,Kobi Baruch,Frédéric Choulet,Martin Mascher,Gil Ben-Zvi,Etienne Paux,Hélène Rimbert,François Balfourier,Juan J. Gutiérrez-González,D Arnaud,ChuShin Koh,Pierre Sourdille,Raj Pasam,Zeev Frenkel,Philippe Rigault,Josquin Tibbits,Vijay Tiwari,M. Spannagl,Daniel Lang,Heidrun Gundlach,Georg Haberer,Klaus Mayer,Danara Ormanbekova,Verena M. Prade,Hana Šimková,Thomas Wicker,Manuel Corpas,Hélène Rimbert,Marius Felder,Nicolas Guilhot,Gemy Kaithakottil,Jens Keilwagen,Philippe Leroy,Thomas Lux,Sven Twardziok,Luca Venturini,Angéla Juhász,Michaël Abrouk,Iris Fischer,Cristóbal Uauy,Philippa Borrill,Ricardo H. Ramírez-González,D Arnaud,Smahane Chalabi,Boulos Chalhoub,Aron T. Cory,Raju Datla,Mark W. Davey,John Jacobs,Stephen J. Robinson,Burkhard Steuernagel,Fred van Ex,Brande B. H. Wulff,Thomas Blein,Abdelhafid Bendahmane,Lorenzo Concia,David Latrasse,Jan Bartoš,Arnaud Bellec,Etienne Paux,Françoise Alfama,Zeev Frenkel,Bikram Gill,Abraham B. Korol,Jane Rogers,Odd-Arne Olsen,Kuldeep Singh,Mario Cáccamo,Edwin van der Vossen,Sonia S. Vautrin,Xiaojun Nie,Tzion Fahima,Vladimir Glikson,Dina Raats,Hadi Quesneville,Helena Toegelová,Jan Vrána,Pierre Sourdille,Benoît Darrier,Delfina Barabaschi,Georg Haberer,Pilar Hernández,Sergio Gálvez,Hikmet Budak,Jonathan D. G. Jones,Kamil Witek,Guotai Yu,Ian Small,Joanna Melonek,Ruonan Zhou,Tatiana Belova,K. Kanyuka,Robert C. King,Kirby T. Nilsen,Sean Walkowiak,Richard D. Cuthbert,R. E. Knox,Krysta Wiebe,Daoquan Xiang,Antje Rohde,T. J. Golds,Jana Čížková,Bala Anı Akpınar,Sezgi Biyiklioglu,Liangliang Gao,Amidou N’Diaye,Lise Pingault,Jan Šafář,Françoise Alfama,Anne‐Françoise Adam‐Blondon,Raphaël Flores,Claire Guerche,Mikaël Loaec,Hadi Quesneville,Janet Condie,Jennifer Ens,Ron MacLachlan,Yifang Tan,Adriana Alberti,Claude Rispe,Valérie Barbe,Arnaud Couloux,Corinne Cruaud,Karine Labadie,Sophie Mangenot,Jacqueline Batley,Gaganpreet Kaur,Ming‐Cheng Luo,Sunish K. Sehgal,Parveen Chhuneja,Om Prakash Gupta,Suruchi Jindal,Parampreet Kaur,Palvi Malik,Priti Sharma,Bharat Yadav,Nisha Singh,Jitendra P. Khurana,Chanderkant Chaudhary,Naveen Sharma,Vinod Kumar,Ajay Kumar Mahato,Sombir Rao,Amitha Mithra Sevanthi,Naveen Sharma,R. S. Tomar,Kateřina Holušová,Ondřej Plíhal,Matthew D. Clark,Darren Heavens,George Kettleborough,Jonathan Wright,Benoît Darrier,Yuqin Hu,Е. А. Салина,Nikolai V. Ravin,K. G. Skryabin,Alexey V. Beletsky,Vitaly V. Kadnikov,Andrey V. Mardanov,M. A. Nesterov,Andrey L. Rakitin,E. M. Sergeeva,Hirokazu Handa,Hajime Kanamori,Satoshi Katagiri,Fuminori Kobayashi,Shuhei Nasuda,Tsuyoshi Tanaka,Jianzhong Wu,Federica Cattonaro,Min Jiumeng,Karl Kugler,Matthias Pfeifer,Simen R. Sandve,Xun Xu,Bujie Zhan,Jacqueline Batley,Philipp E. Bayer,David Edwards,Satomi Hayashi,Zuzana Tulpová,Paul Visendi,Licao Cui,Xianghong Du,Kewei Feng,Xiaojun Nie,Wei Tong,Li Wang
出处
期刊:Science [American Association for the Advancement of Science (AAAS)]
卷期号:361 (6403) 被引量:2659
标识
DOI:10.1126/science.aar7191
摘要

Insights from the annotated wheat genome Wheat is one of the major sources of food for much of the world. However, because bread wheat's genome is a large hybrid mix of three separate subgenomes, it has been difficult to produce a high-quality reference sequence. Using recent advances in sequencing, the International Wheat Genome Sequencing Consortium presents an annotated reference genome with a detailed analysis of gene content among subgenomes and the structural organization for all the chromosomes. Examples of quantitative trait mapping and CRISPR-based genome modification show the potential for using this genome in agricultural research and breeding. Ramírez-González et al. exploited the fruits of this endeavor to identify tissue-specific biased gene expression and coexpression networks during development and exposure to stress. These resources will accelerate our understanding of the genetic basis of bread wheat. Science , this issue p. eaar7191 ; see also p. eaar6089
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