Phosphorene and its components are highly reactive to oxygen when exposed to ambient conditions due to the presence of lone pairs of electrons on phosphorus atoms. Functionalization serves as a solution to prevent the chemical degradation of these materials. In this study, we investigate the impact of a rather strong covalent or non-covalent functionalization of phosphorene (monolayer Black Phosphorus (BP)), few-layer BP, and bulk BP. We use an effective tight-binding Hamiltonian that corresponds to one orbital per site, for which covalent functionalization is simulated by atomic vacancies, and non-covalent functionalization is simulated by Anderson disorder. We show that these two types of functionalisation act differently on the electronic structure and quantum diffusion, in particular on gap and mobility gap for a high degree of functionalisation.