Ferrocene-Functionalized Covalent Organic Frameworks and Target Catalyzed Hairpin Assembly Strategy for Amplified Electrochemical Determination of MicroRNAs

MicroRNAs (miRNAs) are considered as significant biomarkers in early diagnosis and treatment of diseases. Herein, an electrochemical biosensor that uses ferrocene (Fc)-functionalized covalent organic frameworks (COFs), a DNA tetrahedron nanostructure (DTN) biosensing interface, and a target catalyzed hairpin assembly (CHA) strategy has been fabricated and successfully developed for the sensitive and specific determination of microRNA-21 (miR-21). The COF served as a linked substrate for immobilization of gold nanoparticles (AuNPs), Fc-COOH, and complementary DNA probe L1 to prepare the electrochemical signal probe COF/Au/Fc/L1, which has a large surface area, extraordinary catalytic properties, and superior biocompatibility to amplify the current signal. The DTN containing a hairpin sequence H1 at one vertex was elaborately designed to construct the biosensing interface; thus, the CHA could be implemented on the electrode surface. In the presence of miR-21, the CHA reaction between H1 and the hairpin H2 was triggered to produce a great number of duplex DNA (H1/H2) with sticky ends. Then, the signal probe COF/Au/Fc/L1 was modified on the electrode surface through the hybridization between L1 and the sticky end of H1/H2, thereby obtaining an amplified Fc current signal. Under optimal conditions, the biosensor showed a wide linear response ranging from 1 fM to 10 nM miR-21, with a low detection limit of 0.33 fM (S/N = 3). Meanwhile, the method showed acceptable accuracy and precision for the determination of miR-21 in human serum.