Building a stable and robust anti-interference DNA dissipation system by eliminating the accumulation of systemic specified errors

消散 生物系统 化学 核酸 耗散系统 DNA 生命系统 纳米技术 计算机科学 物理 人工智能 生物化学 生物 热力学 材料科学 量子力学
作者
Luojia Wang,Wang Luo,Zhi Weng,Zhongzhong Wang,You Wu,Rong Zhao,Xiaole Han,Xin Liu,Jianhong Zhang,Yujun Yang,Guoming Xie
出处
期刊:Analytica Chimica Acta [Elsevier]
卷期号:1302: 342493-342493
标识
DOI:10.1016/j.aca.2024.342493
摘要

The emergence of DNA nanotechnology has enabled the systematic design of diverse bionic dissipative behaviors under the precise control of nucleic acid nanodevices. Nevertheless, when compared to the dissipation observed in robust living systems, it is highly desirable to enhance the anti-interference for artificial DNA dissipation to withstand perturbations and facilitate repairs within the complex biological environments. In this study, we introduce strategically designed "trash cans" to facilitate kinetic control over interferences, transforming the stochastic binding of individual components within a homogeneous solution into a competitive binding process. This approach effectively eliminates incorrect binding and the accumulation of systemic interferences while ensuring a consistent pattern of energy fluctuation from response to silence. Remarkably, even in the presence of numerous interferences differing by only one base, we successfully achieve complete system reset through multiple cycles, effectively restoring the energy level to a minimum. The system was able to operate stably without any adverse effect under conditions of irregular interference, high-abundance interference, and even multiplex interferences including DNA and RNA crosstalk. This work not only provides an effective paradigm for constructing robust DNA dissipation systems but also greatly broadens the potential of DNA dissipation for applications in high-precision molecular recognition and complex biological reaction networks.
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