A transcriptomics‐based investigation of the mechanism of pulmonary fibrosis induced by nickel oxide nanoparticles

竞争性内源性RNA 小桶 Wnt信号通路 小RNA 生物 信号转导 纤维化 长非编码RNA 细胞生物学 转录组 核糖核酸 计算生物学 基因表达 基因 遗传学 医学 病理
作者
Han Liu,Mengmeng Yang,Kun Li,Qing Gao,Jinfa Zheng,Xuefeng Gong,Hui Wang,Yingbiao Sun,Xuhong Chang
出处
期刊:Environmental Toxicology [Wiley]
卷期号:39 (4): 2374-2389
标识
DOI:10.1002/tox.24088
摘要

Abstract Nickel oxide nanoparticles (NiONPs) are an emerging nanomaterial, which poses a huge threat to the health of workplace population. Nanoparticles induce pulmonary fibrosis, and its mechanisms are associated with noncoding RNAs (ncRNAs). However, ncRNAs and competing endogenous RNA (ceRNA) networks which involved in NiONP‐induced pulmonary fibrosis are still unclear. This study aimed to identify ncRNA‐related ceRNA networks and investigate the role of the Wnt/β‐catenin pathway in pulmonary fibrosis. Male Wistar rats were intratracheally instilled with 0.015, 0.06, and 0.24 mg/kg NiONPs twice a week for 9 weeks. First, we found there were 93 circularRNAs (circRNAs), 74 microRNAs (miRNAs), 124 long non‐coding RNAs (lncRNAs), and 1675 messenger RNAs (mRNAs) differentially expressed through microarray analysis. Second, we constructed ceRNA networks among lncRNAs/circRNAs, miRNAs and mRNAs and identified two ceRNA networks (lnc Melttl16 / miR‐382‐5p / Hsd17b7 and circ Iqch / miR‐181d‐5p / Stat1 ) after real time‐quantitative polymerase chain reaction (RT–qPCR) validation. Furthermore, based on Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses, ncRNAs were found to be involved in biological processes and signaling pathways related to pulmonary fibrosis. KEGG analysis showed that NiONPs activated the Wnt/β‐catenin pathway in rats. In vitro, HFL1 cells were treated with 0, 50, 100, and 200 μg/mL NiONPs for 24 h. We found that NiONPs induced collagen deposition and Wnt/β‐catenin pathway activation. Moreover, a blockade of Wnt/β‐catenin pathway alleviated NiONP‐induced collagen deposition. In conclusion, these observations suggested that ncRNAs were crucial in pulmonary fibrosis development and that the Wnt/β‐catenin pathway mediated the deposition of collagen.
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