液体活检
癌症
体液
生物
癌症生物标志物
转录组
生物标志物
微泡
生物信息学
人口
计算生物学
小RNA
病理
基因
医学
基因表达
遗传学
环境卫生
作者
Sumeng Wang,Ke Zhang,Shanyue Tan,Junyi Xin,Qianyu Yuan,Huanhuan Xu,Xian Xu,Liang Qi,David C. Christiani,Meilin Wang,Lingxiang Liu,Mulong Du
标识
DOI:10.1186/s12943-020-01298-z
摘要
Abstract Cancer is a leading cause of death worldwide, particularly because of its high mortality rate in patients who are diagnosed at late stages. Conventional biomarkers originating from blood are widely used for cancer diagnosis, but their low sensitivity and specificity limit their widespread application in cancer screening among the general population. Currently, emerging studies are exploiting novel, highly-accurate biomarkers in human body fluids that are obtainable through minimally invasive techniques, which is defined as liquid biopsy. Circular RNAs (circRNAs) are a newly discovered class of noncoding RNAs generated mainly by pre-mRNA splicing. Following the rapid development of high-throughput transcriptome analysis techniques, numerous circRNAs have been recognized to exist stably and at high levels in body fluids, including plasma, serum, exosomes, and urine. CircRNA expression patterns exhibit distinctly differences between patients with cancer and healthy controls, suggesting that circRNAs in body fluids potentially represent novel biomarkers for monitoring cancer development and progression. In this study, we summarized the expression of circRNAs in body fluids in a pan-cancer dataset and characterized their clinical applications in liquid biopsy for cancer diagnosis and prognosis. In addition, a user-friendly web interface was developed to visualize each circRNA in fluids ( https://mulongdu.shinyapps.io/circrnas_in_fluids/ ).
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