H&E染色
医学
比例危险模型
原发性中枢神经系统淋巴瘤
淋巴瘤
生存分析
队列
病理
肿瘤科
内科学
染色
作者
Noemie Barillot,Imilla Casado Hernández,Eva Kirasic,Caroline Houillier,Karima Mokhtari,Khê Hoang‐Xuan,Agustí Alentorn
出处
期刊:Neuro-oncology
[Oxford University Press]
日期:2023-09-01
卷期号:25 (Supplement_2): ii103-ii103
标识
DOI:10.1093/neuonc/noad137.346
摘要
Abstract BACKGROUND Primary Central Nervous System Lymphoma (PCNSL) is a rare and heterogeneous disease with dismal prognosis. Recently, four molecular clusters with clinical relevance have been identified with different potential therapeutic targets in each group. Nevertheless, multi-omics data collection and analysis are expensive and not adapted for clinical practice. Therefore, the identification of surrogate markers to identify PCNSL subtypes from routine data is required, like using hematoxylin and eosin slides from brain biopsies. MATERIAL AND METHODS We used a cohort of 108 patients and we selected the 5000 nuclei for each patient among roughly 1,5M nuclei. Once hematoxylin and eosin slides have been digitized, tessellated, normalized and the nuclei have been segmented and filtered with the computation of a solidity score, the PyRadiomics package provides us with more than 800 features for each nuclei. Firstly, we were interested in survival analysis. In a second time, we also used these features for training classification models. We used a partial least squared Cox model, which is a classic Cox model applied to latent components constructed by using linear combinations of the original variables. RESULTS Results for our first cohort are promising (C-index of 0.87, std 0.01), with a significant increase compared to the clinical features model (C-index of 0.68, std 0.03). We are now challenging these results with three other cohorts of brain and systemic lymphoma. CONCLUSION This study paves the way for a stratification of the clinical evolution based on the machine learning analysis of digital pathology in PCNSL that could be easily translated to a broad range of diseases or other brain tumors.
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