Single-cell RNA sequencing analysis reveals the role of TXNDC5 in keloid formation

医学 核糖核酸 计算生物学 细胞 生物信息学 生物 遗传学 基因
作者
Zhikun Liu,Lining Xian,Jianmin Li,Shudan Zheng,Hongju Xie
出处
期刊:CytoJournal [Scientific Scholar]
卷期号:21: 40-40
标识
DOI:10.25259/cytojournal_58_2024
摘要

Objective: Thioredoxin domain-containing protein 5 (TXNDC5) is associated with fibrosis in a variety of organs, but its mechanism of action in keloid is unclear. In this study, we aimed to investigate the mechanism of TXNDC5 in keloid. Material and Methods: Single-cell RNA sequencing data of keloid and normal scar samples obtained from public databases were normalized and clustered using the Seurat package. Pathway enrich analysis was conducted using biological process enrichment analysis and Gene Set Enrichment Analysis (GSEA). In addition, TXNDC5 expression and its effects on migration and invasion of keloid fibroblasts (KFs) were validated based on cell function experiments. Results: A total of five cell types were obtained. The KF clusters were further clustered into two fibroblast subtypes (Fibroblast cells 1 and Fibroblast cells 2). Biological process enrichment analysis showed that transforming growth factor beta (TGF-β) signaling pathway was enriched in the two fibroblast subtypes. GSEA analysis demonstrated that genes in TGF-β signaling pathway were mainly enriched in Fibroblast cells 1, and that genes involved in cell proliferation, migration, and the TGF-β signaling pathway were all high-expressed in fibroblast cells 1. TXNDC5 was positively correlated with fibroblast proliferation, migration and TGF-β signaling pathway, and AUCell score. The cellular experiment confirmed that the messenger RNA and protein levels of TXNDC5 and TGF-β1 were high-expressed in KFs cells ( P <0.001), and that knockdown of TXNDC5 downregulated TGF-β1 expression and inhibited migration and invasion of KFs ( P <0.0001). Conclusion: Our study indicated that TGF-β signaling pathway was enriched in fibroblast cells, and TXNDC5 was positively correlated with proliferation, migration, and TGF-β signaling pathway. Cellular experiment demonstrated that knocking down TXNDC5 downregulated TGF-β1 expression, and suppressed migration and invasion of KFs. The current discoveries provided a new therapeutic strategy for the treatment of keloid.

科研通智能强力驱动
Strongly Powered by AbleSci AI
更新
PDF的下载单位、IP信息已删除 (2025-6-4)

科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
刚刚
在水一方应助洋洋洋采纳,获得10
1秒前
躺平的洋仔完成签到,获得积分10
1秒前
合适台灯完成签到,获得积分10
2秒前
2秒前
2秒前
锦李完成签到,获得积分10
2秒前
3秒前
3秒前
3秒前
4秒前
子安完成签到,获得积分10
4秒前
流星芽芽完成签到,获得积分10
4秒前
5秒前
5秒前
小龙完成签到,获得积分10
5秒前
正己化人应助端庄大米采纳,获得10
6秒前
6秒前
biu发布了新的文献求助10
6秒前
sjh发布了新的文献求助10
6秒前
6秒前
科研通AI6应助胡国伟采纳,获得10
7秒前
ljy完成签到,获得积分10
7秒前
Lucas应助榴莲采纳,获得10
7秒前
7秒前
萧七七发布了新的文献求助10
7秒前
子安发布了新的文献求助20
7秒前
大白发布了新的文献求助10
8秒前
呆萌的清炎完成签到,获得积分20
9秒前
满天星给满天星的求助进行了留言
9秒前
沈佳宁完成签到,获得积分10
9秒前
10秒前
李健的小迷弟应助Suzzw98采纳,获得10
10秒前
好好好完成签到 ,获得积分10
11秒前
大力薯片给大力薯片的求助进行了留言
11秒前
Queena发布了新的文献求助10
11秒前
11秒前
小高完成签到 ,获得积分10
11秒前
11秒前
NexusExplorer应助HuEn采纳,获得10
11秒前
高分求助中
Clinical Microbiology Procedures Handbook, Multi-Volume, 5th Edition 临床微生物学程序手册,多卷,第5版 2000
List of 1,091 Public Pension Profiles by Region 1621
Les Mantodea de Guyane: Insecta, Polyneoptera [The Mantids of French Guiana] | NHBS Field Guides & Natural History 1500
The Victim–Offender Overlap During the Global Pandemic: A Comparative Study Across Western and Non-Western Countries 1000
Lloyd's Register of Shipping's Approach to the Control of Incidents of Brittle Fracture in Ship Structures 1000
Brittle fracture in welded ships 1000
King Tyrant 680
热门求助领域 (近24小时)
化学 材料科学 生物 医学 工程类 计算机科学 有机化学 物理 生物化学 纳米技术 复合材料 内科学 化学工程 人工智能 催化作用 遗传学 数学 基因 量子力学 物理化学
热门帖子
关注 科研通微信公众号,转发送积分 5582941
求助须知:如何正确求助?哪些是违规求助? 4666938
关于积分的说明 14764497
捐赠科研通 4608955
什么是DOI,文献DOI怎么找? 2528962
邀请新用户注册赠送积分活动 1498257
关于科研通互助平台的介绍 1466905