生物
立陶宛
小虾
16S核糖体RNA
系统发育树
拉伤
基因组DNA
微生物学
属
细菌
植物
基因
遗传学
解剖
生态学
作者
Soo Yoon Kim,Jy Young Choi,Yeon Woo Hong,Dong Young Shin,Bok Jin Kim,Jin Kyeong Kang,Kyu Tae Lee,Byung Cheol Cho,Chung Yeon Hwang
标识
DOI:10.1099/ijsem.0.005786
摘要
A Gram-stain-negative, aerobic, rod-shaped bacterial strain, designated HL-LV01T, was isolated from the intestinal tract content of the Pacific white shrimp Litopenaeus vannamei. The 16S rRNA gene sequence of strain HL-LV01T showed that the strain was clearly a member of the genus Maribacter. According to the phylogenetic analyses, strain HL-LV01T was most closely related to the species Maribacter flavus KCTC 42508T with 98.2 % sequence similarity. The average nucleotide identity and digital DNA-DNA hybridization values between strain HL-LV01T and M. flavus KCTC 42508T were 80.6 % and 23.0 %, respectively, indicating different genomic species in the genus Maribacter. Strain HL-LV01T showed optimal growth at 35 °C, pH 7.0, and 2.5 % (w/v) sea salts. The major cellular fatty acids were iso-C15 : 0 (32.5 %), iso-C17 : 0 3-OH (22.3 %), and iso-C15 : 1 G (15.5 %). The major respiratory quinone was menaquinone-6. The polar lipids consisted of phosphatidylethanolamine, three unidentified aminolipids, and seven unidentified lipids. The genomic DNA G+C content of the strain was 39.8 mol%. The comprehensive phylogenetic, genomic, phenotypic, and chemotaxonomic results indicate that strain HL-LV01T is distinct from validly published species of the genus Maribacter. Hence, we propose strain HL-LV01T as a novel species belonging to the genus Maribacter, for which the name Maribacter litopenaei sp. nov. is proposed. The type strain is HL-LV01T (= KCCM 90498T = JCM 35709T).
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