MicroRNAs and nervous system diseases: network insights and computational challenges

小RNA 计算机科学 神经系统 计算生物学 神经科学 生物 遗传学 基因
作者
Jianjian Wang,Yuze Cao,Xiaoyu Lu,Tianfeng Wang,Shuang Li,Xiaotong Kong,Chunrui Bo,Jie Li,Xiaolong Wang,He‐Ping Ma,Lei Li,Huixue Zhang,Shangwei Ning,Lihua Wang
出处
期刊:Briefings in Bioinformatics [Oxford University Press]
卷期号:21 (3): 863-875 被引量:15
标识
DOI:10.1093/bib/bbz032
摘要

The nervous system is one of the most complex biological systems, and nervous system disease (NSD) is a major cause of disability and mortality. Extensive evidence indicates that numerous dysregulated microRNAs (miRNAs) are involved in a broad spectrum of NSDs. A comprehensive review of miRNA-mediated regulatory will facilitate our understanding of miRNA dysregulation mechanisms in NSDs. In this work, we summarized currently available databases on miRNAs and NSDs, star NSD miRNAs, NSD spectrum width, miRNA spectrum width and the distribution of miRNAs in NSD sub-categories by reviewing approximately 1000 studies. In addition, we characterized miRNA-miRNA and NSD-NSD interactions from a network perspective based on miRNA-NSD benchmarking data sets. Furthermore, we summarized the regulatory principles of miRNAs in NSDs, including miRNA synergistic regulation in NSDs, miRNA modules and NSD modules. We also discussed computational challenges for identifying novel miRNAs in NSDs. Elucidating the roles of miRNAs in NSDs from a network perspective would not only improve our understanding of the precise mechanism underlying these complex diseases, but also provide novel insight into the development, diagnosis and treatment of NSDs.

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