蛋白质二级结构
无规线圈
红外光谱学
二维核磁共振波谱
红外线的
光谱学
偏最小二乘回归
近红外光谱
化学
分析化学(期刊)
生物系统
数学
色谱法
物理
生物
光学
立体化学
生物化学
有机化学
量子力学
统计
作者
Chang Liu,Ning Wang,Dandan Wu,Liqi Wang,Na Zhang,Dianyu Yu
出处
期刊:Food Chemistry
[Elsevier]
日期:2024-03-26
卷期号:448: 139074-139074
被引量:5
标识
DOI:10.1016/j.foodchem.2024.139074
摘要
The infrared spectroscopy (IR) signal of protein is prone to being covered by impurity signals, and the accuracy of the secondary structure content calculated using spectral data is poor. To tackle this challenge, a rapid high-precision quantitative model for protein secondary structure was proposed. Firstly, a two-dimensional correlation calculation was performed based on 60 groups of soybean protein isolates (SPI) infrared spectroscopy data, resulting in a two-dimensional correlation infrared spectroscopy (2DCOS-IR). Subsequently, the optimal characteristic bands of the four secondary structures were extracted from the 2DCOS-IR. Ultimately, partial least squares (PLS), long short-term memory (LSTM), and bidirectional long short-term memory (BILSTM) algorithms were used to model the extracted characteristic bands and predict the content of SPI secondary structure. The findings suggested that BILSTM combined with 2DCOS-IR model (2DCOS-BILSTM) exhibited superior predictive performance. The prediction sets for α-helix, β-sheet, β-turn, and random coil were designated as 0.9257, 0.9077, 0.9476, and 0.8443, respectively, and their corresponding RMSEP values were 0.26, 0.48, 0.20, and 0.15. This strategy enhances the precision of IR and facilitates the rapid identification of secondary structure components within SPI, which is vital for the advancement of protein industrial production.
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