A conditional piggyBac transposition system for genetic screening in mice identifies oncogenic networks in pancreatic cancer

生物 插入突变 胰腺癌 遗传学 癌症 癌症研究 转移 基因 计算生物学 癌变 基因组
作者
Roland Rad,Lena Rad,Wei Wang,Alexander Strong,Hannes Ponstingl,Iraad F. Bronner,Matthew Mayho,Katja Steiger,Julia Weber,Maren Hieber,Christian Veltkamp,Stefan Eser,Ulf Geumann,Rupert Öllinger,Magdalena Żukowska,Maxim Barenboim,Roman Maresch,Juan Cadiñanos,Mathias Friedrich,Ignacio Varela,Fernando Constantino‐Casas,Aaron L. Sarver,Jelle ten Hoeve,Haydn M. Prosser,Barbara Seidler,Judith Bauer,Mathias Heikenwälder,Emmanouil Metzakopian,Anne Krug,Ursula Ehmer,Günter Schneider,Thomas Knösel,Petra Rümmele,Daniela E. Aust,Robert Grützmann,Christian Pilarsky,Zemin Ning,Lodewyk F.A. Wessels,Roland M. Schmid,Michael A. Quail,George S. Vassiliou,Iréne Esposito,Pentao Liu,Dieter Saur,Allan Bradley
出处
期刊:Nature Genetics [Nature Portfolio]
卷期号:47 (1): 47-56 被引量:77
标识
DOI:10.1038/ng.3164
摘要

Here we describe a conditional piggyBac transposition system in mice and report the discovery of large sets of new cancer genes through a pancreatic insertional mutagenesis screen. We identify Foxp1 as an oncogenic transcription factor that drives pancreatic cancer invasion and spread in a mouse model and correlates with lymph node metastasis in human patients with pancreatic cancer. The propensity of piggyBac for open chromatin also enabled genome-wide screening for cancer-relevant noncoding DNA, which pinpointed a Cdkn2a cis-regulatory region. Histologically, we observed different tumor subentities and discovered associated genetic events, including Fign insertions in hepatoid pancreatic cancer. Our studies demonstrate the power of genetic screening to discover cancer drivers that are difficult to identify by other approaches to cancer genome analysis, such as downstream targets of commonly mutated human cancer genes. These piggyBac resources are universally applicable in any tissue context and provide unique experimental access to the genetic complexity of cancer.

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