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Anaerobes in diabetic foot infections: pathophysiology, epidemiology, virulence, and management

微生物学 背景(考古学) 生物 梭杆菌 专性厌氧菌 拟杆菌 厌氧菌 毒力 无氧运动 抗生素耐药性 抗生素 细菌 生理学 遗传学 基因 古生物学 生物化学
作者
Fanny Villa,Hélène Marchandin,Jean‐Philippe Lavigne,Sophie Schuldiner,Nicolas Cellier,Albert Sotto,Paul Loubet
出处
期刊:Clinical Microbiology Reviews [American Society for Microbiology]
卷期号:37 (3) 被引量:1
标识
DOI:10.1128/cmr.00143-23
摘要

SUMMARY Diabetic foot infections (DFI) are a public health problem worldwide. DFI are polymicrobial, biofilm-associated infections involving complex bacterial communities organized in functional equivalent pathogroups, all including anaerobes. Indeed, multiple pathophysiological factors favor the growth of anaerobes in this context. However, the prevalence, role, and contribution of anaerobes in wound evolution remain poorly characterized due to their challenging detection. Studies based on culture reviewed herein showed a weighted average of 17% of patients with anaerobes. Comparatively, the weighted average of patients with anaerobes identified by 16S rRNA gene sequencing was 83.8%. Culture largely underestimated not only the presence but also the diversity of anaerobes compared with cultivation-independent approaches but both methods showed that anaerobic Gram-negative bacilli and Gram-positive cocci were the most commonly identified in DFI. Anaerobes were more present in deeper lesions, and their detection was associated with fever, malodorous lesions, and ulcer depth and duration. More specifically, initial abundance of Peptoniphilus spp. was associated with ulcer-impaired healing, Fusobacterium spp. detection was significantly correlated with the duration of DFI, and the presence of Bacteroides spp. was significantly associated with amputation. Antimicrobial resistance of anaerobes in DFI remains slightly studied and warrants more consideration in the context of increasing resistance of the most frequently identified anaerobes in DFI. The high rate of patients with DFI-involving anaerobes, the increased knowledge on the species identified, their virulence factors, and their potential role in wound evolution support recommendations combining debridement and antibiotic therapy effective on anaerobes in moderate and severe DFI.
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