Identification and validation of ferroptosis-related biomarkers in intervertebral disc degeneration

生物 免疫印迹 基因 免疫组织化学 计算生物学 基因表达 遗传学 免疫学
作者
Chenglong Li,Cheng-shuo Fei,Shiyong Le,Zhongming Lai,Bo Yan,Liang Wang,Zhongmin Zhang
出处
期刊:Frontiers in Cell and Developmental Biology [Frontiers Media SA]
卷期号:12 被引量:1
标识
DOI:10.3389/fcell.2024.1416345
摘要

Introduction Ferroptosis plays a significant role in intervertebral disc degeneration (IDD). Understanding the key genes regulating ferroptosis in IDD could reveal fundamental mechanisms of the disease, potentially leading to new diagnostic and therapeutic targets. Methods Public datasets (GSE23130 and GSE70362) and the FerrDb database were analyzed to identify ferroptosis-related genes (DE-FRGs) involved in IDD. Single-cell RNA sequencing data (GSE199866) was used to validate the specific roles and expression patterns of these genes. Immunohistochemistry and Western blot analyses were subsequently conducted in both clinical samples and mouse models to assess protein expression levels across different tissues. Results The analysis identified seven DE-FRGs, including MT1G , CA9 , AKR1C1 , AKR1C2 , DUSP1 , CIRBP , and KLHL24 , with their expression patterns confirmed by single-cell RNA sequencing. Immunohistochemistry and Western blot analysis further revealed that MT1G , CA9 , AKR1C1 , AKR1C2 , DUSP1 , and KLHL24 exhibited differential expression during the progression of IDD. Additionally, the study highlighted the potential immune-modulatory functions of these genes within the IDD microenvironment. Discussion Our study elucidates the critical role of ferroptosis in IDD and identifies specific genes, such as MT1G and CA9 , as potential targets for diagnosis and therapy. These findings offer new insights into the molecular mechanisms underlying IDD and present promising avenues for future research and clinical applications.
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