A proteomic atlas of senescence-associated secretomes for aging biomarker development

生物 衰老 表型 神经退行性变 蛋白质组学 生物标志物 遗传学 计算生物学 细胞生物学 生物信息学 基因 疾病 病理 医学
作者
Nathan Basisty,Abhijit Kale,Ok Hee Jeon,Chisaka Kuehnemann,Therese Payne,Chirag Rao,Anja Holtz,Samah Shah,Vagisha Sharma,Luigi Ferrucci,Judith Campisi,Birgit Schilling
出处
期刊:PLOS Biology [Public Library of Science]
卷期号:18 (1): e3000599-e3000599 被引量:933
标识
DOI:10.1371/journal.pbio.3000599
摘要

The senescence-associated secretory phenotype (SASP) has recently emerged as a driver of and promising therapeutic target for multiple age-related conditions, ranging from neurodegeneration to cancer. The complexity of the SASP, typically assessed by a few dozen secreted proteins, has been greatly underestimated, and a small set of factors cannot explain the diverse phenotypes it produces in vivo. Here, we present the "SASP Atlas," a comprehensive proteomic database of soluble proteins and exosomal cargo SASP factors originating from multiple senescence inducers and cell types. Each profile consists of hundreds of largely distinct proteins but also includes a subset of proteins elevated in all SASPs. Our analyses identify several candidate biomarkers of cellular senescence that overlap with aging markers in human plasma, including Growth/differentiation factor 15 (GDF15), stanniocalcin 1 (STC1), and serine protease inhibitors (SERPINs), which significantly correlated with age in plasma from a human cohort, the Baltimore Longitudinal Study of Aging (BLSA). Our findings will facilitate the identification of proteins characteristic of senescence-associated phenotypes and catalog potential senescence biomarkers to assess the burden, originating stimulus, and tissue of origin of senescent cells in vivo.
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