Identification of miR-20b-5p as an inhibitory regulator in cardiac differentiation via TET2 and DNA hydroxymethylation

调节器 鉴定(生物学) 人类遗传学 抑制性突触后电位 计算生物学 DNA 生物 遗传学 生物信息学 医学 神经科学 基因 生态学
作者
Kexin Li,J S Li,Shengjia Zuo,Xudong Li,Xiantong Chen,Ping Xiao,Hui-Tao Li,Liang Sun,Qian Tao,Hao-Min Zhang,Dongxing Zhu,Xiyong Yu,Guojun Chen,Xueyan Jiang
出处
期刊:Clinical Epigenetics [Springer Nature]
卷期号:16 (1)
标识
DOI:10.1186/s13148-024-01653-7
摘要

Abstract Background Congenital heart disease (CHD) is a prevalent congenital cardiac malformation, which lacks effective early biological diagnosis and intervention. MicroRNAs, as epigenetic regulators of cardiac development, provide potential biomarkers for the diagnosis and treatment of CHD. However, the mechanisms underlying miRNAs-mediated regulation of cardiac development and CHD malformation remain to be further elucidated. This study aimed to explore the function of microRNA-20b-5p (miR-20b-5p) in cardiac development and CHD pathogenesis. Methods and results miRNA expression profiling identified that miR-20b-5p was significantly downregulated during a 12-day cardiac differentiation of human embryonic stem cells (hESCs), whereas it was markedly upregulated in plasma samples of atrial septal defect (ASD) patients. Our results further revealed that miR-20b-5p suppressed hESCs-derived cardiac differentiation by targeting tet methylcytosine dioxygenase 2 (TET2) and 5-hydroxymethylcytosine, leading to a reduction in key cardiac transcription factors including GATA4 , NKX2.5 , TBX5 , MYH6 and cTnT . Additionally, knockdown of TET2 significantly inhibited cardiac differentiation, which could be partially restored by miR-20b-5p inhibition. Conclusions Collectively, this study provides compelling evidence that miR-20b-5p functions as an inhibitory regulator in hESCs-derived cardiac differentiation by targeting TET2, highlighting its potential as a biomarker for ASD.
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