小桶
通路分析
免疫系统
基因
DNA微阵列
生物
下调和上调
计算生物学
生物信息学
癌症研究
基因表达
免疫学
遗传学
转录组
作者
Zhao Zhang,Ye Peng,Jingyi Dang,Xincheng Liu,Dongze Zhu,Yushen Zhang,Yubo Shi,Hongbin Fan
出处
期刊:Oral Diseases
[Wiley]
日期:2022-03-05
卷期号:29 (4): 1657-1667
被引量:16
摘要
This study aimed to elucidate the underlying mechanisms of ameloblastoma (AM) through integrated bioinformatics analysis.We downloaded two microarrays of AMs from the GEO database and identified differentially expressed genes (DEGs) by integrated bioinformatics analysis. The enrichment analysis of DEGs was conducted to characterize GO and KEGG pathways. Protein-protein interaction (PPI) network and hub genes were screened via STRING and Cytoscape. CIBERSORT algorithm was utilized to analyze immune infiltration in AMs. We also verified the diagnostic and therapeutic value of hub genes.Overall, 776 DEGs were identified in AMs through bioinformatics analysis. The function enrichment analysis shed light on pathways involved in AMs. Subsequently, we screened six hub genes via PPI network. Furthermore, we evaluated immune infiltration in AMs and found that macrophages may be participating in the progression of AMs. The upregulated expression of FN1 was related to the macrophages M2 polarization. Finally, ROC analysis indicated that six hub genes had high diagnostic value for AMs and 11 drugs interacted with upregulated hub genes were identified by screening the DGIdb database.This study revealed the underlying mechanisms of pathogenesis and biological behavior of AMs and provided candidate targets for the diagnosis and treatment of AMs.
科研通智能强力驱动
Strongly Powered by AbleSci AI