生物标志物发现
生物标志物
指纹(计算)
脂类学
计算生物学
计算机科学
疾病
采样(信号处理)
血液取样
痴呆
人工智能
机器学习
生物信息学
生物
医学
蛋白质组学
病理
内科学
遗传学
滤波器(信号处理)
基因
计算机视觉
作者
Madeline Isom,Eden P. Go,Heather Desaire
标识
DOI:10.1021/acs.jproteome.3c00368
摘要
Triacylglycerols and wax esters are two lipid classes that have been linked to diseases, including autism, Alzheimer’s disease, dementia, cardiovascular disease, dry eye disease, and diabetes, and thus are molecules worthy of biomarker exploration studies. Since triacylglycerols and wax esters make up the majority of skin-surface lipid secretions, a viable sampling method for these potential biomarkers would be that of groomed latent fingerprints. Currently, however, blood-based sampling protocols predominate in the field. The invasiveness of a blood draw limits its utility to protected populations, including children and the elderly. Herein we describe a noninvasive means for sample collection (from fingerprints) paired with fast MS data-acquisition (MassIVE data set MSV000092742) and efficient data analysis via machine learning. Using both supervised and unsupervised classification, we demonstrate the usefulness of this method in determining whether a variable of interest imparts measurable change within the lipidomic data set. As a proof-of-concept, we show that the method is capable of distinguishing between the fingerprints of different individuals as well as between anatomical sebum collection regions. This noninvasive, high-throughput approach enables future lipidomic biomarker researchers to more easily include underrepresented, protected populations, such as children and the elderly, thus moving the field closer to definitive disease diagnoses that apply to all.
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