细胞凋亡
坏死
程序性细胞死亡
细胞生物学
吞噬作用
生物
DNA断裂
凋亡DNA断裂
半胱氨酸蛋白酶
碎片(计算)
细胞内
细胞色素c
流式细胞术
细胞外
分子生物学
生物化学
遗传学
生态学
作者
Dmitri V. Krysko,Tom Vanden Berghe,Katharina D’Herde,Peter Vandenabeele
出处
期刊:Methods
[Elsevier BV]
日期:2008-03-01
卷期号:44 (3): 205-221
被引量:635
标识
DOI:10.1016/j.ymeth.2007.12.001
摘要
Three major morphologies of cell death have been described: apoptosis (type I), cell death associated with autophagy (type II) and necrosis (type III). Apoptosis and cell death associated with autophagy can be distinguished by certain biochemical events. However, necrosis is characterized mostly in negative terms by the absence of caspase activation, cytochrome c release and DNA oligonucleosomal fragmentation. A particular difficulty in defining necrosis is that in the absence of phagocytosis apoptotic cells become secondary necrotic cells with many morphological features of primary necrosis. In this review, we present a selection of techniques that can be used to identify necrosis and to discriminate it from apoptosis. These techniques rely on the following cell death parameters: (1) morphology (time-lapse and transmission electron microscopy and flow fluorocytometry); (2) cell surface markers (phosphatidylserine exposure versus membrane permeability by flow fluorocytometry); (3) intracellular markers (oligonucleosomal DNA fragmentation by flow fluorocytometry, caspase activation, Bid cleavage and cytochrome c release by western blotting); (4) release of extracellular markers in the supernatant (caspases, HMGB-1 and cytokeratin 18). Finally, we report on methods that can be used to examine interactions between dying cells and phagocytes. We illustrate a quantitative method for detecting phagocytosis of dying cells by flow fluorocytometry. We also describe a recently developed approach based on the use of fluid phase tracers and different kind of microscopy, transmission electron and fluorescence microscopy, to characterize the mechanisms used by phagocytes to internalize dying cells.
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